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The Top 15 Bioinformatics Phylogenetic Trees Open Source Projects

Open source projects categorized as Bioinformatics Phylogenetic Trees
Categories > Data Processing > Bioinformatics
Categories > Phylogenetic Trees
Pycirclize ⭐ 476
Circular visualization in Python (Circos Plot, Chord Diagram)
dependent packages 3total releases 13most recent commit 4 months agopypi pycirclize} Downloads
Cogent3 ⭐ 79
Comparative Genomics Toolkit 3
dependent packages 2total releases 18most recent commit 3 months agopypi cogent3} Downloads
Microbetrace ⭐ 53
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
most recent commit 2 years ago
Itolapi ⭐ 31
Python API for the Interactive Tree of Life (iTOL)
dependent packages 4total releases 20most recent commit 3 months agopypi itolapi} Downloads
Iroki ⭐ 25
Super snazzy online phylogenetic tree viewer with automatic customization using simple, tab-separated text files.
total releases 36most recent commit a year ago
Ghost Tree ⭐ 23
creating hybrid-gene phylogenetic trees for diversity analyses
most recent commit 2 years ago
Cafeplotter ⭐ 13
A tool for plotting CAFE5 gene family expansion/contraction result
most recent commit 7 months ago
Phylotrees.jl ⭐ 13
Phylogenetic trees in Julia
most recent commit 3 years ago
Iroki_cli ⭐ 9
NOTE: The iroki command line tool is no longer maintained. Please see: https://github.com/mooreryan/iroki
most recent commit 6 years ago
Bionim ⭐ 7
A collection of useful algorithms and data structures for bioinformatics
most recent commit 3 years ago
Phylogenies.jl ⭐ 6
The BioJulia package for working with phylogenetic trees and geneologies.
most recent commit 6 years ago
Treeman ⭐ 6
🌳👨 An R package for manipulating phylogentic trees
most recent commit 3 years ago
Quartet ⭐ 6
R package to calculate the similarity of two trees based on the number of shared four-taxon subtrees (or splits)
dependent packages 2total releases 9most recent commit a year ago
Microbetrace ⭐ 5
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
most recent commit 3 years ago
Treegraph2 ⭐ 5
A feature rich and easy to use phylogenetic tree editor
most recent commit 3 years ago
The 4 Most Depended On Bioinformatics Phylogenetic Trees Open Source Projects
Itolapi ⭐ 31
Python API for the Interactive Tree of Life (iTOL)
dependent packages 4total releases 20latest release January 15, 2023most recent commit 3 months agopypi itolapi} Downloads
Pycirclize ⭐ 476
Circular visualization in Python (Circos Plot, Chord Diagram)
dependent packages 3total releases 13latest release July 20, 2023most recent commit 4 months agopypi pycirclize} Downloads
Quartet ⭐ 6
R package to calculate the similarity of two trees based on the number of shared four-taxon subtrees (or splits)
dependent packages 2total releases 9latest release July 08, 2022most recent commit a year ago
Cogent3 ⭐ 79
Comparative Genomics Toolkit 3
dependent packages 2total releases 18latest release September 22, 2023most recent commit 3 months agopypi cogent3} Downloads
The 6 Latest Releases In Bioinformatics Phylogenetic Trees Open Source Projects
Cogent3 ⭐ 79
Comparative Genomics Toolkit 3
dependent packages 2total releases 18latest release September 22, 2023most recent commit 3 months agopypi cogent3} Downloads
Pycirclize ⭐ 476
Circular visualization in Python (Circos Plot, Chord Diagram)
dependent packages 3total releases 13latest release July 20, 2023most recent commit 4 months agopypi pycirclize} Downloads
Itolapi ⭐ 31
Python API for the Interactive Tree of Life (iTOL)
dependent packages 4total releases 20latest release January 15, 2023most recent commit 3 months agopypi itolapi} Downloads
Quartet ⭐ 6
R package to calculate the similarity of two trees based on the number of shared four-taxon subtrees (or splits)
dependent packages 2total releases 9latest release July 08, 2022most recent commit a year ago
Bionim ⭐ 7
A collection of useful algorithms and data structures for bioinformatics
latest release February 28, 2021most recent commit 3 years ago
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