Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About

The Top 21 Bioinformatics Ontology Open Source Projects

Open source projects categorized as Bioinformatics Ontology
Categories > Data Processing > Bioinformatics
Categories > Ontology
Pronto ⭐ 212
A Python frontend to (Open Biomedical) Ontologies.
dependent packages 27total releases 76most recent commit 7 months agopypi pronto} Downloads
Biocypher ⭐ 160
A unifying framework for biomedical research knowledge graphs
dependent packages 1total releases 28most recent commit 3 months agopypi biocypher} Downloads
Obofoundry.github.io ⭐ 140
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
most recent commit 3 months ago
Ontobio ⭐ 114
python library for working with ontologies and ontology associations
dependent packages 2total releases 190most recent commit 3 months agopypi ontobio} Downloads
Edamontology ⭐ 110
EDAM is an ontology of bioscientific data analysis and data management. EDAM concentrates on topics, operations, types of data, and data formats related to analysis, modelling, optimisation, and data life-cycle in biosciences, and in other research and science-based applications.
most recent commit 7 months ago
Owltools ⭐ 76
OWLTools
most recent commit 3 years ago
Obi ⭐ 68
The Ontology for Biomedical Investigations
most recent commit 3 months ago
Nxontology ⭐ 59
NetworkX-based Python library for representing ontologies
dependent packages 2total releases 15most recent commit 9 months agopypi nxontology} Downloads
Ontology Tutorial ⭐ 59
Ontology Tutorial
most recent commit a year ago
Cello ⭐ 53
CellO: Gene expression-based hierarchical cell type classification using the Cell Ontology
total releases 7most recent commit 10 months ago
Biolink Api ⭐ 53
API for linked biological knowledge
most recent commit 2 years ago
Pyobo ⭐ 50
📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
dependent packages 6total releases 64most recent commit 3 months agopypi pyobo} Downloads
Metasra Pipeline ⭐ 42
MetaSRA: normalized sample-specific metadata for the Sequence Read Archive
most recent commit 5 months ago
Orthogene ⭐ 31
🧬 o r t h o g e n e 🧬✨✨✨✨✨✨✨ Interspecies gene mapping✨✨✨✨✨ 🦠 🔁 🌱 🔁 🌳 🔁 🍎 🔁 🍊 🔁 🪱 🔁 🪰 🔁 🐟 🔁 🦎 🔁 🐓 🔁 🦇 🔁 🐄 🔁 🐖 🔁 🐐 🔁 🐎 🔁 🐈 🔁 🐕 🔁 🐁 🔁 🐒 🔁 🦧 🔁 🦍 🔁 🏃‍♀️
most recent commit 4 months ago
Sparqlprog ⭐ 26
logic programming with SPARQL
most recent commit 2 years ago
Ols4 ⭐ 26
Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)
most recent commit 3 months ago
Asap ⭐ 24
ASAP : Automated Single-cell Analysis Pipeline
most recent commit 4 months ago
Pyhpo ⭐ 17
A Python library to work with, analyze, filter and inspect the Human Phenotype Ontology
most recent commit 6 months ago
Ontologies ⭐ 16
Home of the Genomic Feature and Variation Ontology (GFVO)
most recent commit 3 years ago
Hts Rdf ⭐ 9
Managing sequencing data with RDF
most recent commit 7 months ago
Django Phenotype Ontologies ⭐ 6
Django app for parsing/loading Phenotype ontologies (HPO, MONDO, OncoTree, etc)
total releases 19most recent commit 3 years ago
The 5 Most Depended On Bioinformatics Ontology Open Source Projects
Pronto ⭐ 212
A Python frontend to (Open Biomedical) Ontologies.
dependent packages 27total releases 76latest release August 17, 2023most recent commit 7 months agopypi pronto} Downloads
Pyobo ⭐ 50
📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
dependent packages 6total releases 64latest release October 30, 2023most recent commit 3 months agopypi pyobo} Downloads
Ontobio ⭐ 114
python library for working with ontologies and ontology associations
dependent packages 2total releases 190latest release December 01, 2023most recent commit 3 months agopypi ontobio} Downloads
Nxontology ⭐ 59
NetworkX-based Python library for representing ontologies
dependent packages 2total releases 15latest release February 28, 2023most recent commit 9 months agopypi nxontology} Downloads
Biocypher ⭐ 160
A unifying framework for biomedical research knowledge graphs
dependent packages 1total releases 28latest release November 20, 2023most recent commit 3 months agopypi biocypher} Downloads
The 7 Latest Releases In Bioinformatics Ontology Open Source Projects
Ontobio ⭐ 114
python library for working with ontologies and ontology associations
dependent packages 2total releases 190latest release December 01, 2023most recent commit 3 months agopypi ontobio} Downloads
Biocypher ⭐ 160
A unifying framework for biomedical research knowledge graphs
dependent packages 1total releases 28latest release November 20, 2023most recent commit 3 months agopypi biocypher} Downloads
Pyobo ⭐ 50
📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
dependent packages 6total releases 64latest release October 30, 2023most recent commit 3 months agopypi pyobo} Downloads
Pronto ⭐ 212
A Python frontend to (Open Biomedical) Ontologies.
dependent packages 27total releases 76latest release August 17, 2023most recent commit 7 months agopypi pronto} Downloads
Nxontology ⭐ 59
NetworkX-based Python library for representing ontologies
dependent packages 2total releases 15latest release February 28, 2023most recent commit 9 months agopypi nxontology} Downloads
Cello ⭐ 53
CellO: Gene expression-based hierarchical cell type classification using the Cell Ontology
total releases 7latest release September 28, 2022most recent commit 10 months ago
Django Phenotype Ontologies ⭐ 6
Django app for parsing/loading Phenotype ontologies (HPO, MONDO, OncoTree, etc)
total releases 19latest release November 26, 2019most recent commit 3 years ago
Popular Data Processing Categories
Jupyter Notebook
Dataset
Sql
Validation
Pipeline
Translation
Data Science
Classification
Transaction
Scraper
Categories
Privacy | About | Terms | Follow Us On Twitter

Downloads, Dependent Repos, Dependent Packages, Total Releases, Latest Releases data powered by Libraries.io.

Copyright 2018-2024 Awesome Open Source.  All rights reserved.