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The Top 23 Jupyter Notebook Bioinformatics Open Source Projects

Open source projects categorized as Jupyter Notebook Bioinformatics
Categories > Data Processing > Bioinformatics
Categories > Data Processing > Jupyter Notebook
Mmtf Proteomics ⭐ 11
Methods for mapping proteomics data on 3D protein structure.
most recent commit 4 years ago
Living Oceans ⭐ 11
🌊 Robust workflows for gathering data about your local ocean.
most recent commit 9 months ago
Renet2 ⭐ 10
RENET2: High-Performance Full-text Gene-Disease Relation Extraction with Iterative Training Data Expansion
most recent commit 2 years ago
Pysmash ⭐ 10
Smash molecule and obtain significant fragments
total releases 1most recent commit 3 years ago
Smpl ⭐ 10
most recent commit a year ago
Deep Purpose Tutorial ⭐ 9
Repository for the HackBio'2021 Internship for Team Drug-Development-A
most recent commit 3 years ago
Teaching Ibioic Intro To Bioinformatics ⭐ 9
Course materials for the IBioIC Introduction to Bioinformatics training course
most recent commit 7 years ago
Flowbio ⭐ 9
A fast, easy way to present complex bioinformatics pipelines to biologists
most recent commit 6 years ago
Aims ⭐ 9
AIMS - Automated Immune Molecule Separator: An analysis pipeline for distinguishing distinct subsets of Ig and MHC molecules. See below site for documentation
total releases 15most recent commit 6 months ago
Pymultiomics ⭐ 9
Python toolbox for multi-omics data mapping and analysis
total releases 5most recent commit a year ago
Pygmql ⭐ 9
Python Library for data analysis based on GMQL
total releases 16most recent commit 2 years ago
Managing_your_biological_data_with_python_3 ⭐ 9
<<Managing Your Biological Data with Python>> wirtten in Python 3
most recent commit 7 years ago
Data Science Python ⭐ 9
Data Science in Python course
most recent commit a year ago
Drpca ⭐ 9
Differential Robust PCA
most recent commit 2 years ago
Public_notebooks ⭐ 8
Repository of Jupyter Notebooks created by the Bio2Byte group
most recent commit 7 months ago
Adversarial Gene Expression ⭐ 8
Adversarial generation of gene expression data using Generative Adversarial Networks
most recent commit 2 years ago
Multiple_sclerosis_proj ⭐ 8
Data analysis platform/structure, machine learning/AI project for multiple sclerosis
most recent commit 2 years ago
Mobspy ⭐ 8
The Meta-Species Oriented Biosystem Syntax in Python (MobsPy) was invented to facilitate the design of complex Chemical Reaction Networks
total releases 15most recent commit 3 months ago
Famli ⭐ 8
Functional Analysis of Metagenomes by Likelihood Inference
total releases 3most recent commit 4 years ago
Project Diploid Assembly ⭐ 8
Pipeline code for creating a fully haplotype-resolved assembly from a combination of PacBio/ONT long reads and Illumina Strand-seq data
most recent commit 2 years ago
Julia Theosysbio ⭐ 8
most recent commit 7 years ago
All Subtype Classification ⭐ 8
A Fast and Efficient CNN Model for B-ALL Diagnosis and its Subtypes Classification using Peripheral Blood Smear Images
most recent commit 5 months ago
Pycellerator ⭐ 8
Biological Simulation using Reaction-Like Arrows
most recent commit 6 years ago
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