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The Top 23 Julia Bioinformatics Open Source Projects

Open source projects categorized as Julia Bioinformatics
Categories > Data Processing > Bioinformatics
Dash ⭐ 19,976
Data Apps & Dashboards for Python. No JavaScript Required.
dependent packages 639total releases 174most recent commit 3 months agopypi dash} Downloads
Dash.jl ⭐ 475
Dash for Julia - A Julia interface to the Dash ecosystem for creating analytic web applications in Julia. No JavaScript required.
most recent commit 4 months ago
Bio.jl ⭐ 256
[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia
most recent commit 8 months ago
Biosequences.jl ⭐ 141
Biological sequences for the julia language
most recent commit 3 months ago
Biostructures.jl ⭐ 77
A Julia package to read, write and manipulate macromolecular structures (particularly proteins)
most recent commit 4 months ago
Pangraph ⭐ 72
A bioinformatic toolkit to align genome assemblies into pangenome graphs
most recent commit 3 months ago
Geneticsmakie.jl ⭐ 66
🧬High-performance genetics- and genomics-related data visualization using Makie.jl
most recent commit 3 months ago
Mitos.jl ⭐ 64
Mutual Information Tools for protein Sequence analysis in Julia
most recent commit 3 months ago
Opengene.jl ⭐ 61
(No maintenance) OpenGene, core libraries for NGS data analysis and bioinformatics in Julia
most recent commit 2 years ago
Lynnlangit ⭐ 59
Lynn Langit profile
most recent commit 4 months ago
Flashweave.jl ⭐ 52
Inference of microbial interaction networks from large-scale heterogeneous abundance data
most recent commit 10 months ago
Bioalignments.jl ⭐ 51
Sequence alignment tools
most recent commit a year ago
Pipelines.jl ⭐ 39
A lightweight and powerful Julia package for computational pipelines and workflows.
most recent commit 4 months ago
Geneticvariation.jl ⭐ 33
Datastructures and algorithms for working with genetic variation
most recent commit a year ago
Bio3dview.jl ⭐ 32
A Julia package to view macromolecular structures in the REPL, in a Jupyter notebook/JupyterLab or in Pluto
most recent commit 8 months ago
Genomegraphs.jl ⭐ 29
A modern genomics framework for julia
most recent commit 4 years ago
Biosymbols.jl ⭐ 28
Nucleic and amino acid primitive types
most recent commit 3 months ago
Xam.jl ⭐ 24
Parse and process SAM and BAM formatted files
most recent commit 3 months ago
Fusiondirect.jl ⭐ 23
(No maintenance) Detect gene fusion directly from raw fastq files
most recent commit 7 years ago
Seqmaker.jl ⭐ 19
(No maintenance) Next Generation Sequencing Simulation with SNP, Variation and Sequencing Error Integrated
most recent commit 7 years ago
Catt ⭐ 18
An ultra-sensitive and precise tool for characterizing T cell CDR3 sequences in TCR-seq and RNA-seq data.
most recent commit 6 months ago
Gaussdca.jl ⭐ 18
Multivariate Gaussian Direct Coupling Analysis for residue contact prediction in protein families - Julia module
most recent commit 2 years ago
Substitutionmodels.jl ⭐ 16
Biological Sequence Substitution Models for Julia
most recent commit a year ago
The 4 Latest Releases In Julia Bioinformatics Open Source Projects
Dash ⭐ 19,976
Data Apps & Dashboards for Python. No JavaScript Required.
dependent packages 639total releases 174latest release November 28, 2023most recent commit 3 months agopypi dash} Downloads
Mitos.jl ⭐ 64
Mutual Information Tools for protein Sequence analysis in Julia
latest release December 21, 2017most recent commit 3 months ago
Bio.jl ⭐ 256
[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia
latest release February 27, 2017most recent commit 8 months ago
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