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The Top 23 Golang Bioinformatics Open Source Projects

Open source projects categorized as Golang Bioinformatics
Categories > Data Processing > Bioinformatics
Seqkit ⭐ 1,133
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
total releases 122most recent commit 3 months ago
Scipipe ⭐ 1,010
Robust, flexible and resource-efficient pipelines using Go and the commandline
total releases 47most recent commit 9 months ago
Reflow ⭐ 946
A language and runtime for distributed, incremental data processing in the cloud
total releases 2most recent commit 6 months ago
Csvtk ⭐ 923
A cross-platform, efficient and practical CSV/TSV toolkit in Golang
dependent packages 1total releases 83most recent commit 3 months ago
Rush ⭐ 782
A cross-platform command-line tool for executing jobs in parallel
total releases 32most recent commit 5 months ago
Poly ⭐ 620
A Go package for engineering organisms.
most recent commit 3 months ago
Awesome ⭐ 565
Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.
most recent commit 7 months ago
Arvados ⭐ 354
An open source platform for managing and analyzing biomedical big data
total releases 9most recent commit 3 months ago
Vcfanno ⭐ 334
annotate a VCF with other VCFs/BEDs/tabixed files
dependent packages 1total releases 41most recent commit 5 months ago
Biogo ⭐ 309
biogo is a bioinformatics library for Go
dependent packages 13total releases 7most recent commit 2 years ago
Taxonkit ⭐ 306
A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV
total releases 53most recent commit 5 months ago
Goleft ⭐ 203
goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary
dependent packages 1total releases 31most recent commit 4 months ago
Philosopher ⭐ 104
A complete toolkit for shotgun proteomics data analysis
most recent commit 3 months ago
Bio ⭐ 86
A lightweight and high-performance bioinformatics package in Golang
dependent packages 13total releases 32most recent commit 4 months ago
Goenrich ⭐ 68
GO enrichment with python -- pandas meets networkx
dependent packages 3total releases 27most recent commit 4 years agopypi goenrich} Downloads
Awe ⭐ 62
workflow and resource management system for bioinformatics data analysis
total releases 43most recent commit 4 years ago
Awesome Scientific Go ⭐ 62
Go libraries for scientific computing
most recent commit 4 years ago
Gosemsim ⭐ 52
⛳ GO-terms Semantic Similarity Measures
most recent commit 3 months ago
Go Dicom ⭐ 51
DICOM parser for golang
dependent packages 6total releases 1most recent commit 2 years ago
Mmseqs2 App ⭐ 44
MMseqs2 app to run on your workstation or servers
most recent commit 6 months ago
Bio ⭐ 42
Bioinformatic infrastructure libraries
most recent commit 4 years ago
Gnfinder ⭐ 36
GNfinder finds scientific names in UTF8 texts, PDF files, MS Word/Excel documents, URLs etc.
dependent packages 9total releases 79most recent commit 6 months ago
Gnparser ⭐ 35
GNparser normalises scientific names and extracts their semantic elements.
dependent packages 8total releases 102most recent commit 4 months ago
The 10 Most Depended On Golang Bioinformatics Open Source Projects
Biogo ⭐ 309
biogo is a bioinformatics library for Go
dependent packages 13total releases 7latest release October 29, 2021most recent commit 2 years ago
Bio ⭐ 86
A lightweight and high-performance bioinformatics package in Golang
dependent packages 13total releases 32latest release November 11, 2023most recent commit 4 months ago
Gnfinder ⭐ 36
GNfinder finds scientific names in UTF8 texts, PDF files, MS Word/Excel documents, URLs etc.
dependent packages 9total releases 79latest release July 01, 2023most recent commit 6 months ago
Gnparser ⭐ 35
GNparser normalises scientific names and extracts their semantic elements.
dependent packages 8total releases 102latest release October 12, 2023most recent commit 4 months ago
Go Dicom ⭐ 51
DICOM parser for golang
dependent packages 6total releases 1latest release November 05, 2021most recent commit 2 years ago
Crypt4gh ⭐ 6
Crypt4GH standard implementation
dependent packages 4total releases 32latest release October 10, 2023most recent commit 3 months ago
Goenrich ⭐ 68
GO enrichment with python -- pandas meets networkx
dependent packages 3total releases 27latest release July 15, 2020most recent commit 4 years agopypi goenrich} Downloads
Gonetics ⭐ 30
Go / Golang Bioinformatics Library
dependent packages 2total releases 2latest release August 16, 2021most recent commit 3 years ago
Gnverifier ⭐ 16
GNverifier verifies scientific names against more than 100 biodiversity databases
dependent packages 2total releases 52latest release May 03, 2022most recent commit 4 months ago
Bionode Go ⭐ 7
Gene Ontology in Bionode (WIP)
dependent packages 2total releases 2latest release March 27, 2015most recent commit 7 years agonpm bionode-go} Downloads
The 10 Latest Releases In Golang Bioinformatics Open Source Projects
Csvtk ⭐ 923
A cross-platform, efficient and practical CSV/TSV toolkit in Golang
dependent packages 1total releases 83latest release November 27, 2023most recent commit 3 months ago
Seqkit ⭐ 1,133
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
total releases 122latest release November 18, 2023most recent commit 3 months ago
Gobio ⭐ 11
miscellaneous script-like stuff in go for bioinformatics
latest release November 15, 2023most recent commit 7 years ago
Rush ⭐ 782
A cross-platform command-line tool for executing jobs in parallel
total releases 32latest release November 13, 2023most recent commit 5 months ago
Bio ⭐ 86
A lightweight and high-performance bioinformatics package in Golang
dependent packages 13total releases 32latest release November 11, 2023most recent commit 4 months ago
Gnparser ⭐ 35
GNparser normalises scientific names and extracts their semantic elements.
dependent packages 8total releases 102latest release October 12, 2023most recent commit 4 months ago
Crypt4gh ⭐ 6
Crypt4GH standard implementation
dependent packages 4total releases 32latest release October 10, 2023most recent commit 3 months ago
Arvados ⭐ 354
An open source platform for managing and analyzing biomedical big data
total releases 9latest release September 21, 2023most recent commit 3 months ago
Gnfinder ⭐ 36
GNfinder finds scientific names in UTF8 texts, PDF files, MS Word/Excel documents, URLs etc.
dependent packages 9total releases 79latest release July 01, 2023most recent commit 6 months ago
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