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The Top 10 Bioinformatics Epigenetics Open Source Projects

Open source projects categorized as Bioinformatics Epigenetics
Categories > Data Processing > Bioinformatics
Categories > Epigenetics
Nanopolish ⭐ 496
Signal-level algorithms for MinION data
most recent commit 8 months ago
Janggu ⭐ 205
Deep learning infrastructure for genomics
total releases 19most recent commit 3 years ago
Deepsignal ⭐ 98
Detecting methylation using signal-level features from Nanopore sequencing reads
total releases 11most recent commit 10 months ago
Cpgtools ⭐ 29
Python package to analyze DNA methylation data
most recent commit 9 months ago
Hichipper ⭐ 28
A preprocessing and QC pipeline for HiChIP data
total releases 24most recent commit 2 years ago
Workflows ⭐ 12
CWL based Bioinformatics Workflows
total releases 11most recent commit 3 months ago
Hicbrowser ⭐ 11
Simple web browser to visualize HiC tracks
most recent commit 4 years ago
Triti Map ⭐ 9
A Snakemake-based pipeline for gene mapping in Triticeae.
most recent commit 2 years ago
Genextender ⭐ 8
R/Bioconductor package for optimized functional annotation of ChIP-seq data
most recent commit 5 years ago
Seqcode ⭐ 5
Suite of command-line software for high-performance graphical analysis of ChIP-seq/RNA-seq/ATAC-seq data
most recent commit 2 years ago
The 4 Latest Releases In Bioinformatics Epigenetics Open Source Projects
Deepsignal ⭐ 98
Detecting methylation using signal-level features from Nanopore sequencing reads
total releases 11latest release March 31, 2022most recent commit 10 months ago
Janggu ⭐ 205
Deep learning infrastructure for genomics
total releases 19latest release August 04, 2020most recent commit 3 years ago
Hichipper ⭐ 28
A preprocessing and QC pipeline for HiChIP data
total releases 24latest release June 17, 2019most recent commit 2 years ago
Workflows ⭐ 12
CWL based Bioinformatics Workflows
total releases 11latest release December 13, 2018most recent commit 3 months ago
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