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The Top 13 Bioinformatics Deep Neural Networks Open Source Projects

Open source projects categorized as Bioinformatics Deep Neural Networks
Categories > Data Processing > Bioinformatics
Categories > Machine Learning > Deep Neural Networks
Quantq ⭐ 61
The repository for the Machine Learning and Big Data with kdb+/q book by Novotny et al.
most recent commit a year ago
Deepchrome ⭐ 41
Bioinformatics16: DeepChrome: Deep-learning for predicting gene expression from histone modifications
most recent commit 4 years ago
Omicselector ⭐ 26
OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning diagnostic tool development from high-throughput high-throughput omics experiments and other multidimensional datasets. Initially developed for miRNA-seq, RNA-seq and qPCR.
most recent commit 10 months ago
Stackeddae ⭐ 20
Stacked Denoising AutoEncoder based on TensorFlow
most recent commit 5 years ago
Decode ⭐ 19
A prediction model for differential gene expression (DE) based on genome-wide regulatory interactions
most recent commit a year ago
Gedfn ⭐ 19
GEDFN: Graph-Embedded Deep Feedforward Network
most recent commit 5 years ago
Coding_excercises ⭐ 19
A public repo for slides and exercise for the "Introduction to deep learning for biologists" Physalia course, by Nelson Nazzicari and Filippo Biscarini
most recent commit 6 months ago
Tensorflow Dnns For Predicting Dna Transcription Factor Binding ⭐ 13
Deep neural networks implemented in TensorFlow & Python for predicting whether transcription factors will bind to given DNA sequences
most recent commit 7 years ago
Deepbio ⭐ 8
This is a curated list of tutorials, projects, libraries, videos, papers, books and anything related to applications of Deep Learning to biomedicine. Feel free to make a pull request to contribute to this list.
most recent commit 4 years ago
Convolutional Embedded Networks ⭐ 7
Convolutional Embedded Networks for Population Scale Clustering and Bio-ancestry Inferencing
most recent commit 4 years ago
Mamnet ⭐ 6
MAMnet uses a deep learning network to call genetic variants from third generation DNA sequencing data.
most recent commit 6 months ago
Inpactor2 ⭐ 6
Inpactor2: LTR retrotransposon detector and classificator using Deep Learning
most recent commit a year ago
Cancertherapy ⭐ 5
To use deep learning to identify patients whose tumor DNA mutations “look similar to” other tumors for which treatments are effective.
most recent commit 5 years ago
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