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The Top 8 Python Bioinformatics Cwl Open Source Projects

Open source projects categorized as Python Bioinformatics Cwl

Categories > Data Processing > Bioinformatics

Categories > Control Flow > Cwl

Categories > Programming Languages > Python

Arvados ⭐ 354

An open source platform for managing and analyzing biomedical big data

total releases 9most recent commit 3 months ago

[Historical] Reproducible Analyses for Bioinformatics

most recent commit 5 years ago

Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

dependent packages 1total releases 280most recent commit 4 months ago

pypi tibanna} Downloads

[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows

dependent packages 7total releases 62most recent commit 8 months ago

pypi janis-pipelines.core} Downloads

Project Manager for NGS data analysis

most recent commit 2 years ago

Sevenbridges Cwl ⭐ 14

Seven Bridges Python library for programatic generation of CWL workflows.

most recent commit 3 years ago

Clihelpparser ⭐ 13

Library for reading the output from CLI help commands, and generating machine readable schemas (CWL etc)

most recent commit 3 years ago

Containerinception ⭐ 6

Gerber: Generalized Easy Reproducible Bioinformatics Environment wRapper

most recent commit 6 years ago

The 2 Most Depended On Python Bioinformatics Cwl Open Source Projects

[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows

dependent packages 7total releases 62latest release August 30, 2023most recent commit 8 months ago

pypi janis-pipelines.core} Downloads

Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

dependent packages 1total releases 280latest release October 06, 2023most recent commit 4 months ago

pypi tibanna} Downloads

The 3 Latest Releases In Python Bioinformatics Cwl Open Source Projects

Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

dependent packages 1total releases 280latest release October 06, 2023most recent commit 4 months ago

pypi tibanna} Downloads

Arvados ⭐ 354

An open source platform for managing and analyzing biomedical big data

total releases 9latest release September 21, 2023most recent commit 3 months ago

[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows

dependent packages 7total releases 62latest release August 30, 2023most recent commit 8 months ago

pypi janis-pipelines.core} Downloads

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