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The Top 15 Bioinformatics Common Workflow Language Open Source Projects

Open source projects categorized as Bioinformatics Common Workflow Language
Categories > Data Processing > Bioinformatics
Categories > Common Workflow Language
Sevenbridges Python ⭐ 44
SevenBridges Python Api bindings
dependent packages 3total releases 117most recent commit 3 months agopypi sevenbridges-python} Downloads
Janis ⭐ 39
[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
dependent packages 7total releases 62most recent commit 8 months agopypi janis-pipelines.core} Downloads
Workflux ⭐ 30
An open-source, cloud-ready web application for simplified deployment of big data workflows.
most recent commit 3 months ago
Virtus ⭐ 28
A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.
most recent commit 2 years ago
Sevenbridges R ⭐ 27
Seven Bridges API Client, CWL Schema, Meta Schema, and SDK Helper in R
most recent commit 3 years ago
Docker 4dn Hic ⭐ 23
Docker for 4DN Hi-C processing pipeline
most recent commit 5 years ago
Gdc Dnaseq Cwl ⭐ 21
CWL for GDC DNASeq workflows
most recent commit 9 months ago
Yacle ⭐ 16
Yet Another CWL Engine by Golang
total releases 1most recent commit 5 years ago
Cwl.go ⭐ 15
CWL (and input file) parser for Golang, used by github.com/otiai10/yacle
total releases 1most recent commit 5 years ago
Sevenbridges Cwl ⭐ 14
Seven Bridges Python library for programatic generation of CWL workflows.
most recent commit 3 years ago
Workflows ⭐ 12
CWL based Bioinformatics Workflows
total releases 11most recent commit 3 months ago
Kf Somatic Workflow ⭐ 11
🔬 Somatic workflow for Kids-First
most recent commit 3 months ago
Kf Alignment Workflow ⭐ 9
🔬 Alignment workflow for Kids-First DRC
most recent commit 3 months ago
Kf Rnaseq Workflow ⭐ 9
🔬 RNA-Seq workflow for Kids-First DRC
most recent commit 3 months ago
Kf Jointgenotyping Workflow ⭐ 6
🔬 Joint genotyping workflow for Kids-First DRC
most recent commit a year ago
The 2 Most Depended On Bioinformatics Common Workflow Language Open Source Projects
Janis ⭐ 39
[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
dependent packages 7total releases 62latest release August 30, 2023most recent commit 8 months agopypi janis-pipelines.core} Downloads
Sevenbridges Python ⭐ 44
SevenBridges Python Api bindings
dependent packages 3total releases 117latest release November 02, 2022most recent commit 3 months agopypi sevenbridges-python} Downloads
The 5 Latest Releases In Bioinformatics Common Workflow Language Open Source Projects
Janis ⭐ 39
[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
dependent packages 7total releases 62latest release August 30, 2023most recent commit 8 months agopypi janis-pipelines.core} Downloads
Sevenbridges Python ⭐ 44
SevenBridges Python Api bindings
dependent packages 3total releases 117latest release November 02, 2022most recent commit 3 months agopypi sevenbridges-python} Downloads
Yacle ⭐ 16
Yet Another CWL Engine by Golang
total releases 1latest release March 19, 2019most recent commit 5 years ago
Workflows ⭐ 12
CWL based Bioinformatics Workflows
total releases 11latest release December 13, 2018most recent commit 3 months ago
Cwl.go ⭐ 15
CWL (and input file) parser for Golang, used by github.com/otiai10/yacle
total releases 1latest release August 31, 2018most recent commit 5 years ago
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