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The Top 21 R Rstats Bioconductor Open Source Projects

Open source projects categorized as R Rstats Bioconductor
Karyoploter ⭐ 278
karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
most recent commit 3 months ago
Mixomics ⭐ 126
Development repository for the Bioconductor package 'mixOmics '
most recent commit 6 months ago
Geoquery ⭐ 73
The bridge between the NCBI Gene Expression Omnibus and Bioconductor
most recent commit 9 months ago
Voyager ⭐ 49
From geospatial to spatial -omics
most recent commit 4 months ago
Biocthis ⭐ 47
Automate package and project setup for Bioconductor packages
most recent commit 5 months ago
Derfinder ⭐ 42
Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches
most recent commit a year ago
Recount ⭐ 40
R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
most recent commit a year ago
Wdlrunr ⭐ 34
Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
most recent commit 2 years ago
Spectra ⭐ 29
Low level infrastructure to handle MS spectra
most recent commit 4 months ago
Tidysq ⭐ 28
tidy processing of biological sequences in R
total releases 3most recent commit 2 years ago
Recount3 ⭐ 24
Explore and download data from the recount3 project
most recent commit a year ago
Qfeatures ⭐ 19
Quantitative features for mass spectrometry data
most recent commit 3 months ago
Biocpkgtools ⭐ 19
Computable build reports, package metadata, and download stats from the Bioconductor project
most recent commit 3 months ago
Mscoreutils ⭐ 16
Core Utils for Mass Spectrometry Data
most recent commit 3 months ago
Alps ⭐ 12
AnaLysis routines for ePigenomicS data.
most recent commit 5 years ago
Recount Website ⭐ 12
Code for the Recount project
most recent commit 8 months ago
Regionreport ⭐ 9
Generate HTML report for a set of genomic regions or DESeq2/edgeR results
most recent commit a year ago
Poma ⭐ 8
📦 Tools for Omics Data Analysis
most recent commit 3 months ago
Copynumberplots ⭐ 6
R package to create plots representing copy number data using karyoploteR
most recent commit 7 months ago
Recount Contributions ⭐ 5
Contribute your human Illumina RNA-seq data to recount2
most recent commit 6 years ago
Categorycompare ⭐ 5
Github repo of the categoryCompare meta-analysis package
most recent commit 6 years ago
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