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The Top 23 Bids Open Source Projects

Open source projects categorized as Bids
Categories > Bids
Fieldtrip ⭐ 782
The MATLAB toolbox for MEG, EEG and iEEG analysis
most recent commit 3 months ago
Fmriprep ⭐ 597
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
dependent packages 1total releases 178most recent commit 16 days agopypi fmriprep} Downloads
Bids Starter Kit ⭐ 245
Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets
most recent commit 3 months ago
Bids Specification ⭐ 235
Brain Imaging Data Structure (BIDS) Specification
dependent packages 1total releases 8most recent commit 3 months agopypi bidsschematools} Downloads
Pybids ⭐ 199
Python tools for querying and manipulating BIDS datasets.
dependent packages 69total releases 48most recent commit 4 months agopypi pybids} Downloads
Bids Examples ⭐ 152
A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.
most recent commit a month ago
Dcm2bids ⭐ 146
Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
dependent packages 1total releases 25most recent commit a month agopypi dcm2bids} Downloads
Laraestimate ⭐ 133
LaraEstimate is a complete Estimates/Quotes System made with Laravel 7 and VueJS.
most recent commit a year ago
Bidscoin ⭐ 110
BIDScoin converts your source-level neuroimaging data to BIDS
total releases 32most recent commit 3 months ago
Mne Bids ⭐ 110
MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.
dependent packages 10total releases 16most recent commit 3 months agopypi mne-bids} Downloads
Mne Bids Pipeline ⭐ 106
Automatically process entire electrophysiological datasets using MNE-Python.
most recent commit 3 months ago
Openneuro ⭐ 91
A free and open platform for analyzing and sharing neuroimaging data
dependent packages 5total releases 174most recent commit 3 months agonpm @openneuro/client} Downloads
Teneto ⭐ 78
Temporal Network Tools
dependent packages 2total releases 24most recent commit 5 months agopypi teneto} Downloads
Micapipe ⭐ 69
micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below
most recent commit 3 months ago
Dmriprep ⭐ 61
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
total releases 8most recent commit 5 months ago
Phys2bids ⭐ 56
Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, check the issues with the BrainHack labels!
dependent packages 2total releases 28most recent commit 4 months agopypi phys2bids} Downloads
Halfpipe ⭐ 56
ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
most recent commit 3 months ago
Bids Matlab ⭐ 47
MATLAB / Octave tools for BIDS datasets
most recent commit 3 months ago
Spincounterview ⭐ 45
🎡 一个类似于码表变化的旋转计数器动画控件
most recent commit 5 years ago
Remodnav ⭐ 44
Robust Eye Movement Detection for Natural Viewing
dependent packages 1total releases 8most recent commit 9 months agopypi remodnav} Downloads
Fmriflows ⭐ 42
fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st and 2nd-level analysis, as well as multivariate pattern analysis.
most recent commit 2 years ago
Brkraw ⭐ 41
BrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data
dependent packages 1total releases 34most recent commit 23 days agopypi bruker} Downloads
Samri ⭐ 39
Small Animal Magnetic Resonance Imaging via Python.
most recent commit 6 months ago
The 10 Most Depended On Bids Open Source Projects
Pybids ⭐ 199
Python tools for querying and manipulating BIDS datasets.
dependent packages 69total releases 48latest release November 30, 2023most recent commit 4 months agopypi pybids} Downloads
Mne Bids ⭐ 110
MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.
dependent packages 10total releases 16latest release November 16, 2023most recent commit 3 months agopypi mne-bids} Downloads
Openneuro ⭐ 91
A free and open platform for analyzing and sharing neuroimaging data
dependent packages 5total releases 174latest release November 27, 2023most recent commit 3 months agonpm @openneuro/client} Downloads
Teneto ⭐ 78
Temporal Network Tools
dependent packages 2total releases 24latest release February 17, 2021most recent commit 5 months agopypi teneto} Downloads
Dcm2bids ⭐ 146
Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
dependent packages 1total releases 25latest release October 12, 2023most recent commit a month agopypi dcm2bids} Downloads
Remodnav ⭐ 44
Robust Eye Movement Detection for Natural Viewing
dependent packages 1total releases 8latest release April 25, 2019most recent commit 9 months agopypi remodnav} Downloads
Bids Specification ⭐ 235
Brain Imaging Data Structure (BIDS) Specification
dependent packages 1total releases 8latest release September 28, 2023most recent commit 3 months agopypi bidsschematools} Downloads
Brkraw ⭐ 41
BrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data
dependent packages 1total releases 34latest release May 24, 2021most recent commit 23 days agopypi bruker} Downloads
The 10 Latest Releases In Bids Open Source Projects
Pybids ⭐ 199
Python tools for querying and manipulating BIDS datasets.
dependent packages 69total releases 48latest release November 30, 2023most recent commit 4 months agopypi pybids} Downloads
Openneuro ⭐ 91
A free and open platform for analyzing and sharing neuroimaging data
dependent packages 5total releases 174latest release November 27, 2023most recent commit 3 months agonpm @openneuro/client} Downloads
Mne Bids ⭐ 110
MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.
dependent packages 10total releases 16latest release November 16, 2023most recent commit 3 months agopypi mne-bids} Downloads
Bidscoin ⭐ 110
BIDScoin converts your source-level neuroimaging data to BIDS
total releases 32latest release October 30, 2023most recent commit 3 months ago
Dcm2bids ⭐ 146
Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
dependent packages 1total releases 25latest release October 12, 2023most recent commit a month agopypi dcm2bids} Downloads
Bids Specification ⭐ 235
Brain Imaging Data Structure (BIDS) Specification
dependent packages 1total releases 8latest release September 28, 2023most recent commit 3 months agopypi bidsschematools} Downloads
Bids2table ⭐ 5
Efficiently index large-scale BIDS neuroimaging datasets and derivatives
total releases 1latest release August 09, 2023most recent commit 8 months ago
Bidsmreye ⭐ 6
BIDS app using deepMReye to decode eye motion for fMRI time series data.
total releases 4latest release January 26, 2023most recent commit 3 months ago
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