Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About

The Top 16 Amazon Web Services Bioinformatics Open Source Projects

Open source projects categorized as Amazon Web Services Bioinformatics
Categories > Cloud Computing > Amazon Web Services
Categories > Data Processing > Bioinformatics
Nextflow ⭐ 2,447
A DSL for data-driven computational pipelines
dependent packages 16total releases 250most recent commit 3 months ago
Reflow ⭐ 946
A language and runtime for distributed, incremental data processing in the cloud
total releases 2most recent commit 6 months ago
Redun ⭐ 464
Yet another redundant workflow engine
dependent packages 1total releases 18most recent commit 5 months agopypi redun} Downloads
Arvados ⭐ 354
An open source platform for managing and analyzing biomedical big data
total releases 9most recent commit 3 months ago
Serratus ⭐ 219
Ultra-deep search for novel viruses
most recent commit a year ago
Variantspark ⭐ 121
machine learning for genomic variants
total releases 38most recent commit a year ago
Tibanna ⭐ 68
Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.
dependent packages 1total releases 280most recent commit 3 months agopypi tibanna} Downloads
Teamteri ⭐ 50
Genomics (computational bioinformatic data analysis) running on GCP, AWS or Azure
most recent commit 8 months ago
Metaspace ⭐ 39
Cloud engine and platform for metabolite annotation for imaging mass spectrometry
total releases 32most recent commit 4 months ago
Aws For Bioinformatics ⭐ 38
AWS for Bioinformatics Researchers
most recent commit 3 months ago
Htsget Rs ⭐ 36
Rust htsget server
dependent packages 5total releases 15most recent commit 3 months agocargo htsget-config} Downloads
Hotsub ⭐ 23
Command line tool to run batch jobs concurrently with ETL framework on AWS or other cloud computing resources
total releases 22most recent commit 5 years ago
Daylily ⭐ 15
A NGS analysis framework for WGS data, which automates the entire process of spinning up AWS EC2 spot instances and processing FASTQ to snvVCF in <60m, for dollars a sample and achieving Fscores of 0.998.
most recent commit 6 months ago
S3 Rust Htslib Bam ⭐ 13
AWS lambda S3 + rust-htslib: A serverless bioinformatics example
most recent commit 2 years ago
Pyfgaws ⭐ 9
Python tools and APIs for working with AWS
total releases 12most recent commit 4 months ago
Multiple_sclerosis_proj ⭐ 8
Data analysis platform/structure, machine learning/AI project for multiple sclerosis
most recent commit 2 years ago
The 4 Most Depended On Amazon Web Services Bioinformatics Open Source Projects
Nextflow ⭐ 2,447
A DSL for data-driven computational pipelines
dependent packages 16total releases 250latest release November 24, 2023most recent commit 3 months ago
Htsget Rs ⭐ 36
Rust htsget server
dependent packages 5total releases 15latest release November 02, 2023most recent commit 3 months agocargo htsget-config} Downloads
Redun ⭐ 464
Yet another redundant workflow engine
dependent packages 1total releases 18latest release November 12, 2023most recent commit 5 months agopypi redun} Downloads
The 10 Latest Releases In Amazon Web Services Bioinformatics Open Source Projects
Nextflow ⭐ 2,447
A DSL for data-driven computational pipelines
dependent packages 16total releases 250latest release November 24, 2023most recent commit 3 months ago
Redun ⭐ 464
Yet another redundant workflow engine
dependent packages 1total releases 18latest release November 12, 2023most recent commit 5 months agopypi redun} Downloads
Htsget Rs ⭐ 36
Rust htsget server
dependent packages 5total releases 15latest release November 02, 2023most recent commit 3 months agocargo htsget-config} Downloads
Arvados ⭐ 354
An open source platform for managing and analyzing biomedical big data
total releases 9latest release September 21, 2023most recent commit 3 months ago
Metaspace ⭐ 39
Cloud engine and platform for metabolite annotation for imaging mass spectrometry
total releases 32latest release September 21, 2023most recent commit 4 months ago
Pyfgaws ⭐ 9
Python tools and APIs for working with AWS
total releases 12latest release June 13, 2022most recent commit 4 months ago
Variantspark ⭐ 121
machine learning for genomic variants
total releases 38latest release May 20, 2022most recent commit a year ago
Reflow ⭐ 946
A language and runtime for distributed, incremental data processing in the cloud
total releases 2latest release March 04, 2021most recent commit 6 months ago
Popular Cloud Computing Categories
Amazon Web Services
Cloud Computing
Azure
Lambda Functions
Heroku
Serverless
S3
Google Cloud Platform
Aws Lambda
Aws Ecs
Categories
Privacy | About | Terms | Follow Us On Twitter

Downloads, Dependent Repos, Dependent Packages, Total Releases, Latest Releases data powered by Libraries.io.

Copyright 2018-2024 Awesome Open Source.  All rights reserved.