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The Top 23 Anatomy Open Source Projects

Open source projects categorized as Anatomy
Categories > Anatomy
Brainrender ⭐ 480
a python based software for visualization of neuroanatomical and morphological data.
dependent packages 6total releases 79most recent commit 3 months agopypi brainrender} Downloads
Openbiomechanics ⭐ 154
The open source initiative for anonymized, elite-level athletic motion capture data. Run by Driveline Baseball.
most recent commit 6 months ago
Uberon ⭐ 126
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
most recent commit 3 months ago
Cell Ontology ⭐ 126
An ontology of cell types
most recent commit 3 months ago
Navis ⭐ 79
Python library for analysis of neuroanatomical data.
dependent packages 8total releases 32most recent commit 18 days agopypi navis} Downloads
3d Artists Handbook ⭐ 41
Covers all stages of the 3D creation process, as well as the theory side of things. Helpful for 2D artists as well.
most recent commit 3 months ago
Pymaid ⭐ 23
Python library to interface with CATMAID servers. Fully interoperable with navis.
most recent commit 13 days ago
Lasagna ⭐ 21
3-D imaging visualisation through slicing
most recent commit a year ago
Bodyparts3d ⭐ 20
Clone of the BodyParts3D/Anatomography 3D model files
most recent commit 3 years ago
Anatomogram ⭐ 19
Anatomogram illustrating Expression Atlas experiments
dependent packages 6total releases 41most recent commit 4 years agonpm anatomogram} Downloads
Drosophila Anatomy Developmental Ontology ⭐ 18
The home of the Drosophila anatomy ontology
most recent commit 3 months ago
Stitchit ⭐ 16
Stitching of large tiled datasets
most recent commit 7 days ago
Speccer ⭐ 11
A zero dependency package to highlight elements
dependent packages 2total releases 50most recent commit 5 months agonpm @phun-ky/speccer} Downloads
Biological Spatial Ontology ⭐ 11
An ontology for respresenting spatial concepts, anatomical axes, gradients, regions, planes, sides, and surfaces
most recent commit a year ago
Brainreg Napari ⭐ 11
Automated 3D brain registration in napari with support for multiple species and atlases.
dependent packages 2total releases 11most recent commit 4 months agopypi brainreg-napari} Downloads
Oskrhq Uikit ⭐ 11
A collection of UI Elements for rapid design and prototyping.
most recent commit 6 years ago
Medline ⭐ 11
Computing term cooccurrence in MEDLINE
most recent commit 3 years ago
Myowebtoolkit ⭐ 10
Web tools to do research with Myo
most recent commit 3 years ago
Freesurfer Stats ⭐ 10
Python Library to Read FreeSurfer's Cortical Parcellation Anatomical Statistics
most recent commit a year ago
Developmental Stage Ontologies ⭐ 9
Source files for various species-specific stage ontologies
most recent commit 8 months ago
Zebrafish Phenotype Ontology ⭐ 9
A vocabulary for describing Zebrafish Phenotypes
most recent commit 3 months ago
Vr Neuroanatomy ⭐ 8
Explore and dissect a complete brain model in VR. Made for the Oculus Quest in Unity.
most recent commit 4 years ago
C Elegans Gross Anatomy Ontology ⭐ 8
C. elegans Gross Anatomy Ontology
most recent commit 4 months ago
The 5 Most Depended On Anatomy Open Source Projects
Navis ⭐ 79
Python library for analysis of neuroanatomical data.
dependent packages 8total releases 32latest release July 28, 2023most recent commit 18 days agopypi navis} Downloads
Anatomogram ⭐ 19
Anatomogram illustrating Expression Atlas experiments
dependent packages 6total releases 41latest release May 08, 2019most recent commit 4 years agonpm anatomogram} Downloads
Brainrender ⭐ 480
a python based software for visualization of neuroanatomical and morphological data.
dependent packages 6total releases 79latest release December 01, 2023most recent commit 3 months agopypi brainrender} Downloads
Brainreg Napari ⭐ 11
Automated 3D brain registration in napari with support for multiple species and atlases.
dependent packages 2total releases 11latest release November 06, 2023most recent commit 4 months agopypi brainreg-napari} Downloads
Speccer ⭐ 11
A zero dependency package to highlight elements
dependent packages 2total releases 50latest release October 18, 2023most recent commit 5 months agonpm @phun-ky/speccer} Downloads
The 5 Latest Releases In Anatomy Open Source Projects
Brainrender ⭐ 480
a python based software for visualization of neuroanatomical and morphological data.
dependent packages 6total releases 79latest release December 01, 2023most recent commit 3 months agopypi brainrender} Downloads
Brainreg Napari ⭐ 11
Automated 3D brain registration in napari with support for multiple species and atlases.
dependent packages 2total releases 11latest release November 06, 2023most recent commit 4 months agopypi brainreg-napari} Downloads
Speccer ⭐ 11
A zero dependency package to highlight elements
dependent packages 2total releases 50latest release October 18, 2023most recent commit 5 months agonpm @phun-ky/speccer} Downloads
Navis ⭐ 79
Python library for analysis of neuroanatomical data.
dependent packages 8total releases 32latest release July 28, 2023most recent commit 18 days agopypi navis} Downloads
Anatomogram ⭐ 19
Anatomogram illustrating Expression Atlas experiments
dependent packages 6total releases 41latest release May 08, 2019most recent commit 4 years agonpm anatomogram} Downloads
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