Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About

The Top 23 Analysis Molecular Dynamics Open Source Projects

Open source projects categorized as Analysis Molecular Dynamics
Categories > Code Quality > Analysis
Categories > Science > Molecular Dynamics
Mdanalysis ⭐ 1,154
MDAnalysis is a Python library to analyze molecular dynamics simulations.
dependent packages 111total releases 48most recent commit 3 months agopypi MDAnalysis} Downloads
Mdtraj ⭐ 519
An open library for the analysis of molecular dynamics trajectories
dependent packages 7total releases 5most recent commit 3 months ago
Pyemma ⭐ 292
🚂 Python API for Emma's Markov Model Algorithms 🚂
dependent packages 6total releases 47most recent commit 7 months agopypi pyEMMA} Downloads
Freud ⭐ 248
Powerful, efficient particle trajectory analysis in scientific Python.
dependent packages 8total releases 30most recent commit 3 months agopypi freud-analysis} Downloads
Viamd ⭐ 191
Visual Interactive Analysis of Molecular Dynamics
most recent commit 3 months ago
Pytraj ⭐ 154
Python interface of cpptraj
dependent packages 6total releases 34most recent commit 3 months agopypi pytraj} Downloads
Msmbuilder ⭐ 124
🏗️ Statistical models for biomolecular dynamics 🏗️
dependent packages 1total releases 15most recent commit 3 years agopypi msmbuilder} Downloads
Pensa ⭐ 77
PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.
total releases 11most recent commit 5 months ago
Pycontact ⭐ 34
Analysis of non-covalent interactions in MD trajectories
total releases 2most recent commit a year ago
Contact_map ⭐ 31
Contact map analysis for biomolecules; based on MDTraj
total releases 12most recent commit 8 months ago
Pyemma_tutorials ⭐ 29
How to analyze molecular dynamics data with PyEMMA
most recent commit 5 years ago
Pmda ⭐ 23
Parallel algorithms for MDAnalysis
total releases 6most recent commit 2 years ago
Gromacs Fda ⭐ 22
Force Distribution Analysis (FDA) for GROMACS
most recent commit 9 months ago
Kif ⭐ 20
KIF - Key Interactions Finder. A python package to identify the key molecular interactions that regulate any conformational change.
most recent commit 6 months ago
Mdtoolbox.jl ⭐ 19
MDToolbox.jl: A Julia package for molecular dynamics trajectories analysis and modeling of biomolecules
most recent commit 5 months ago
Freud Examples ⭐ 13
Examples for the freud library.
most recent commit 5 months ago
Lindemann ⭐ 13
lindemann is a python package to calculate the Lindemann index of a lammps trajectory
total releases 7most recent commit a year ago
Lintools ⭐ 11
Python script that creates 2D protein-ligand interaction images
total releases 1most recent commit 6 years ago
Paratemp ⭐ 10
A package for molecular dynamics analysis and parallel tempering in GROMACS
most recent commit 3 years ago
Relax ⭐ 10
Molecular dynamics by NMR data analysis (mirror of the relax repository)
most recent commit 5 months ago
Mode Task ⭐ 10
PCA and normal mode analysis of proteins
most recent commit 3 years ago
Sitator ⭐ 7
Unsupervised landmark analysis for jump detection in molecular dynamics simulations.
most recent commit 4 years ago
Md Tracks ⭐ 6
MD-Tracks is a statistical analysis toolkit for molecular dynamics and monte carlo simulations.
most recent commit a year ago
The 6 Most Depended On Analysis Molecular Dynamics Open Source Projects
Mdanalysis ⭐ 1,154
MDAnalysis is a Python library to analyze molecular dynamics simulations.
dependent packages 111total releases 48latest release December 02, 2023most recent commit 3 months agopypi MDAnalysis} Downloads
Freud ⭐ 248
Powerful, efficient particle trajectory analysis in scientific Python.
dependent packages 8total releases 30latest release November 28, 2023most recent commit 3 months agopypi freud-analysis} Downloads
Mdtraj ⭐ 519
An open library for the analysis of molecular dynamics trajectories
dependent packages 7total releases 5latest release September 13, 2022most recent commit 3 months ago
Pytraj ⭐ 154
Python interface of cpptraj
dependent packages 6total releases 34latest release May 04, 2020most recent commit 3 months agopypi pytraj} Downloads
Pyemma ⭐ 292
🚂 Python API for Emma's Markov Model Algorithms 🚂
dependent packages 6total releases 47latest release September 19, 2022most recent commit 7 months agopypi pyEMMA} Downloads
Msmbuilder ⭐ 124
:building_construction: Statistical models for biomolecular dynamics :building_construction:
dependent packages 1total releases 15latest release April 27, 2017most recent commit 3 years agopypi msmbuilder} Downloads
The 10 Latest Releases In Analysis Molecular Dynamics Open Source Projects
Mdanalysis ⭐ 1,154
MDAnalysis is a Python library to analyze molecular dynamics simulations.
dependent packages 111total releases 48latest release December 02, 2023most recent commit 3 months agopypi MDAnalysis} Downloads
Freud ⭐ 248
Powerful, efficient particle trajectory analysis in scientific Python.
dependent packages 8total releases 30latest release November 28, 2023most recent commit 3 months agopypi freud-analysis} Downloads
Pyemma ⭐ 292
🚂 Python API for Emma's Markov Model Algorithms 🚂
dependent packages 6total releases 47latest release September 19, 2022most recent commit 7 months agopypi pyEMMA} Downloads
Mdtraj ⭐ 519
An open library for the analysis of molecular dynamics trajectories
dependent packages 7total releases 5latest release September 13, 2022most recent commit 3 months ago
Lindemann ⭐ 13
lindemann is a python package to calculate the Lindemann index of a lammps trajectory
total releases 7latest release January 26, 2022most recent commit a year ago
Mdproptools ⭐ 5
A Python package for LAMMPS analysis tools
total releases 3latest release January 14, 2022most recent commit 7 months ago
Contact_map ⭐ 31
Contact map analysis for biomolecules; based on MDTraj
total releases 12latest release October 28, 2020most recent commit 8 months ago
Pycontact ⭐ 34
Analysis of non-covalent interactions in MD trajectories
total releases 2latest release September 01, 2020most recent commit a year ago
Pytraj ⭐ 154
Python interface of cpptraj
dependent packages 6total releases 34latest release May 04, 2020most recent commit 3 months agopypi pytraj} Downloads
Popular Code Quality Categories
Eslint
Printer
Prettier
Static Analysis
Stylelint
Sonarqube
Beautifier
Tslint
Code Style
Ctags
Categories
Privacy | About | Terms | Follow Us On Twitter

Downloads, Dependent Repos, Dependent Packages, Total Releases, Latest Releases data powered by Libraries.io.

Copyright 2018-2024 Awesome Open Source.  All rights reserved.