Bio Phylo
Bio::Phylo - Phyloinformatic analysis using Perl
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Awesome Biology | 313 | 3 months ago | cc0-1.0 | |||||||
| Curated (meta)list of resources for Biology. | ||||||||||
| Cogent3 | 79 |  | 2 | 3 months ago | 18 | September 22, 2023 | 35 | bsd-3-clause | Python | |
| Comparative Genomics Toolkit 3 | ||||||||||
| Wgd | 74 | 6 months ago | 17 | gpl-3.0 | Python | |||||
| Python package and CLI for whole-genome duplication related analyses | ||||||||||
| Clipkit | 44 | 5 months ago | 34 | October 02, 2023 | 1 | mit | Python | |||
| a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference | ||||||||||
| Phykit | 44 | 4 months ago | 50 | October 17, 2023 | mit | Python | ||||
| a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies | ||||||||||
| Dockerfiles | 39 | 3 months ago | 16 | apache-2.0 | Dockerfile | |||||
| This repository contains Docker files for the images maintained by the Phenotypic Evolution Group at the Institute for Molecular and Cell Biology / Instituto de Investigação e Inovação em Saúde da Universidade do Porto. | ||||||||||
| Agora | 37 | a year ago | 3 | other | Python | |||||
| Algorithm For Gene Order Reconstruction in Ancestors | ||||||||||
| Zol | 28 | 4 months ago | 2 | May 06, 2023 | 1 | bsd-3-clause | Python | |||
| zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.) | ||||||||||
| Busco_phylogenomics | 26 | 6 months ago | 1 | mit | Python | |||||
| BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins | ||||||||||
| Biokit | 20 | 4 months ago | 13 | November 11, 2023 | mit | Python | ||||
| a versatile toolkit for processing and analyzing diverse types of sequence data | ||||||||||
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