Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Dash Cytoscape | 555 | 2 | 3 months ago | 9 | May 25, 2021 | 72 | mit | Python | ||
Interactive network visualization in Python and Dash, powered by Cytoscape.js | ||||||||||
Canvasxpress | 282 | 4 | 3 months ago | 43 | November 08, 2023 | 7 | R | |||
CanvasXpress: A JavaScript Library for Data Analytics with Full Audit Trail Capabilities. | ||||||||||
Pybel | 89 | 4 | 52 | 2 years ago | 91 | February 11, 2022 | 30 | mit | Python | |
🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL) | ||||||||||
Ananse | 72 | 4 months ago | 25 | mit | Python | |||||
Prediction of key transcription factors in cell fate determination using enhancer networks. See full ANANSE documentation for detailed installation instructions and usage examples. | ||||||||||
Nxontology | 59 | 2 | 9 months ago | 15 | February 28, 2023 | 3 | apache-2.0 | Python | ||
NetworkX-based Python library for representing ontologies | ||||||||||
Flashweave.jl | 52 | 10 months ago | 6 | other | Julia | |||||
Inference of microbial interaction networks from large-scale heterogeneous abundance data | ||||||||||
Graph Network Explainability | 51 | 4 years ago | Jupyter Notebook | |||||||
Explainability techniques for Graph Networks, applied to a synthetic dataset and an organic chemistry task. Code for the workshop paper "Explainability Techniques for Graph Convolutional Networks" (ICML19) | ||||||||||
Metage2metabo | 42 | 3 months ago | 33 | September 26, 2022 | 12 | lgpl-3.0 | Jupyter Notebook | |||
From annotated genomes to metabolic screening in large scale microbiotas | ||||||||||
Synthetic | 37 | a year ago | mit | Python | ||||||
Symbolic Generators for Complex Networks | ||||||||||
Safepy | 34 | 4 months ago | 4 | gpl-3.0 | Python | |||||
Python implementation of Spatial Analysis of Functional Enrichment (SAFE) |