Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Atacseq | 145 | 8 months ago | 14 | mit | Nextflow | |||||
ATAC-seq peak-calling and QC analysis pipeline | ||||||||||
Longread_umi | 39 | 3 years ago | 7 | gpl-3.0 | Shell | |||||
Katuali | 33 | 4 years ago | 6 | other | Python | |||||
Analysis pipelines from Oxford Nanopore Technologies' Research Division | ||||||||||
C3poa | 29 | 2 years ago | 12 | gpl-2.0 | Python | |||||
Computational pipeline for calling consensi on R2C2 nanopore data | ||||||||||
Sars Cov 2 | 23 | 7 months ago | 2 | mit | Jupyter Notebook | |||||
SARS-CoV-2 variant calling and consensus assembly pipeline | ||||||||||
Pipeline Umi Amplicon | 21 | a year ago | 10 | other | Python | |||||
Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers | ||||||||||
Tracespipe | 16 | 10 months ago | gpl-3.0 | Shell | ||||||
Reconstruction and analysis of viral and host genomes at multi-organ level | ||||||||||
Sc2 Illumina Pipeline | 14 | 3 years ago | 11 | agpl-3.0 | Nextflow | |||||
Bioinformatics pipeline for SARS-CoV-2 sequencing at CZ Biohub | ||||||||||
Grapevine | 14 | 3 years ago | 12 | gpl-3.0 | Python | |||||
Process consensus file for COG-UK data | ||||||||||
Pipeline For Isoseq | 13 | 6 years ago | 1 | Perl | ||||||
A pipeline for isoseq |