Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Deepvariant | 2,978 | 4 months ago | 8 | bsd-3-clause | Python | |||||
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data. | ||||||||||
Deeplearning Biology | 1,846 | a year ago | ||||||||
A list of deep learning implementations in biology | ||||||||||
Deep Review | 1,186 | 2 years ago | 422 | other | HTML | |||||
A collaboratively written review paper on deep learning, genomics, and precision medicine | ||||||||||
Healthcare_ml | 426 | a year ago | 2 | |||||||
A curated list of ML|NLP resources for healthcare. | ||||||||||
Enformer Pytorch | 359 | 1 | 4 months ago | 98 | November 03, 2023 | 6 | mit | Python | ||
Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch | ||||||||||
Nucleotide Transformer | 305 | 3 months ago | 12 | other | Python | |||||
🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics | ||||||||||
Dna Diffusion | 297 | 3 months ago | 1 | March 24, 2023 | 15 | mit | Jupyter Notebook | |||
🧬 Generative modeling of regulatory DNA sequences with diffusion probabilistic models 💨 | ||||||||||
Dragonn | 245 | 2 years ago | 15 | mit | Jupyter Notebook | |||||
A toolkit to learn how to model and interpret regulatory sequence data using deep learning. | ||||||||||
Janggu | 205 | 3 years ago | 19 | August 04, 2020 | gpl-3.0 | Jupyter Notebook | ||||
Deep learning infrastructure for genomics | ||||||||||
Deep Rules | 198 | 2 years ago | 65 | other | HTML | |||||
Ten Quick Tips for Deep Learning in Biology |