Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Getting Started With Genomics Tools And Resources | 991 | 2 months ago | 1 | Shell | ||||||
Unix, R and python tools for genomics and data science | ||||||||||
Cbioportal | 535 | 2 months ago | 495 | agpl-3.0 | Java | |||||
cBioPortal for Cancer Genomics | ||||||||||
Maftools | 400 | 2 months ago | 17 | mit | R | |||||
Summarize, Analyze and Visualize MAF files from TCGA or in-house studies. | ||||||||||
Delly | 391 | a month ago | 31 | bsd-3-clause | C++ | |||||
DELLY2: Structural variant discovery by integrated paired-end and split-read analysis | ||||||||||
Ideogram | 265 | 5 | 8 | 2 months ago | 76 | September 05, 2023 | 32 | other | JavaScript | |
Chromosome visualization for the web | ||||||||||
Pygeno | 242 | 1 | 4 years ago | 18 | December 15, 2021 | 5 | apache-2.0 | Python | ||
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs | ||||||||||
Somalier | 224 | 6 months ago | 42 | mit | Nim | |||||
fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy" | ||||||||||
Palimpsest | 56 | 3 years ago | 23 | R | ||||||
An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer. | ||||||||||
Teamteri | 50 | 7 months ago | Shell | |||||||
Genomics (computational bioinformatic data analysis) running on GCP, AWS or Azure | ||||||||||
Sevenbridges Python | 44 | 7 | 3 | 2 months ago | 117 | November 02, 2022 | 7 | apache-2.0 | Python | |
SevenBridges Python Api bindings |