Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Mrbayes | 201 | 6 months ago | 1 | September 08, 2021 | 64 | gpl-3.0 | C | |||
MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentation and downloading the program, please see the home page: | ||||||||||
Pecan | 193 | 3 months ago | 452 | other | R | |||||
The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox. | ||||||||||
Sigminer | 119 | 4 months ago | 32 | August 21, 2023 | 3 | other | R | |||
🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html | ||||||||||
Honeybadger | 93 | 3 years ago | 15 | gpl-3.0 | R | |||||
HMM-integrated Bayesian approach for detecting CNV and LOH events from single-cell RNA-seq data | ||||||||||
Svtyper | 78 | 1 | 1 | 4 years ago | 4 | September 04, 2019 | 37 | mit | Python | |
Bayesian genotyper for structural variants | ||||||||||
Cogaps | 53 | 3 months ago | 22 | bsd-3-clause | C++ | |||||
Bayesian MCMC matrix factorization algorithm | ||||||||||
Busco_phylogenomics | 26 | 6 months ago | 1 | mit | Python | |||||
BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins | ||||||||||
Whale.jl | 10 | 2 years ago | 3 | lgpl-2.1 | Julia | |||||
Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation | ||||||||||
Hammlet | 10 | 4 years ago | 2 | gpl-3.0 | C++ | |||||
Fast Bayesian Hidden Markov Model with Wavelet Compression | ||||||||||
Baghera | 6 | 2 years ago | mit | Python | ||||||
Bayesian Gene Heritability Analysis from GWAS summary statistics |