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Svdb

structural variant database software
Stars
26
License
mit
Open Issues
10
Most Recent Commit
a year ago
Programming Language
Python
Total Releases
1
Latest Release
April 16, 2019
Categories
Repo
Alternatives To Svdb
Project NameStarsDownloadsRepos Using ThisPackages Using ThisMost Recent CommitTotal ReleasesLatest ReleaseOpen IssuesLicenseLanguage
Isown28
4 years ago11apache-2.0Perl
Svdb26
a year ago1April 16, 201910mitPython
structural variant database software
Cmdbtools21
2 years ago14July 06, 20222otherPython
Command line tools for CMDB varaints browser
Sift4g_create_genomic_db18
7 months ago5gpl-3.0Perl
Create genomic databases with SIFT predictions. Input is an organism's genomic DNA (.fa) file and the gene annotation file (.gtf). Output will be a database that can be used with SIFT4G_Annotator.jar to annotate VCF files.
Snapperdb14
5 years ago6November 23, 20185gpl-3.0Python
Bcfanno12
3 years agoC
A fast and flexible program to annotate/interpret genetic variants in VCF/BCF file
Precisionmedicinetoolkit6
6 years agomitPython
Search public databases for given genotypic information
Gdbigtools6
3 months ago17December 01, 2021gpl-3.0Python
GDBIGtools: A command line tools for GDBIG varaints browser
Vcfdbr5
3 years ago1mitR
These scripts reformat a VCF into a SQLite database, with R
Clinical_variant_database5
7 years agootherRuby
Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensembl dataset. Originally developed as part of a Masters in Bioinformatics project @ University of Exeter
Alternatives To Svdb
Select To Compare
Isown ⭐ 28
most recent commit 4 years ago
Svdb ⭐ 26
structural variant database software
total releases 1most recent commit a year ago
Cmdbtools ⭐ 21
Command line tools for CMDB varaints browser
total releases 14most recent commit 2 years ago
Snapperdb ⭐ 14
total releases 6most recent commit 5 years ago


Suggest An Alternative To SVDB
Alternative Project Comparisons
Svdb vs Isown
Svdb vs Cmdbtools
Svdb vs Sift4g_create_genomic_db
Svdb vs Snapperdb
Svdb vs Bcfanno
Svdb vs Precisionmedicinetoolkit
Svdb vs Gdbigtools
Svdb vs Vcfdbr
Svdb vs Clinical_variant_database
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