Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Rust Bio | 1,428 | 49 | 89 | 3 months ago | 87 | December 09, 2023 | 105 | mit | Rust | |
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration. | ||||||||||
Megahit | 442 | a year ago | 78 | gpl-3.0 | C++ | |||||
Ultra-fast and memory-efficient (meta-)genome assembler | ||||||||||
Coursera Specializations | 68 | 6 years ago | mit | Jupyter Notebook | ||||||
Solutions to assignments of Coursera Specializations - Deep learning, Machine learning, Algorithms & Data Structures, Image Processing and Python For Everybody | ||||||||||
Geneticvariation.jl | 33 | a year ago | 10 | mit | Julia | |||||
Datastructures and algorithms for working with genetic variation | ||||||||||
Gclib | 30 | 2 months ago | 4 | other | C++ | |||||
GCLib - Genomic C++ library of reusable code for bioinformatics projects | ||||||||||
Sonlib | 27 | 4 | 2 years ago | 1 | January 08, 2017 | 21 | mit | C | ||
Small general purpose library for C and Python with focus on bioinformatics. | ||||||||||
Avxwindowfmindex | 24 | 3 months ago | bsd-3-clause | C | ||||||
A fast, AVX2 and ARM Neon accelerated FM index library | ||||||||||
Btllib | 19 | 4 months ago | 29 | other | C++ | |||||
Bioinformatics Technology Lab common code library | ||||||||||
Vargeno | 15 | 5 years ago | 4 | mit | C++ | |||||
Towards fast and accurate SNP genotyping from whole genome sequencing data for bedside diagnostics. | ||||||||||
Phylogenetics | 11 | 8 months ago | other | OCaml | ||||||
Algorithms and datastructures for phylogenetics |