Phyloscanner
Phylogenetics between and within hosts at once, all along the genome.
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Pggb | 315 | 3 months ago | 40 | mit | Shell | |||||
| the pangenome graph builder | ||||||||||
| Phyloscanner | 41 | 3 months ago | 10 | gpl-3.0 | HTML | |||||
| Phylogenetics between and within hosts at once, all along the genome. | ||||||||||
| Metapop | 28 | a year ago | 23 | mit | R | |||||
| A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations | ||||||||||
| Sars Cov 2 | 12 | 2 years ago | 3 | Python | ||||||
| Daily analyses of genomic SARS-CoV-2 data | ||||||||||
| Corason | 11 | 3 years ago | 5 | agpl-3.0 | Perl | |||||
| Bioinformatic Tools for study Evolution of metabolic diversity | ||||||||||
| Qtl2data | 6 | 3 years ago | 1 | HTML | ||||||
| Example data for R/qtl2 | ||||||||||
| Got_plasmid | 5 | 6 years ago | 14 | mit | R | |||||
| Retreive and visualize plasmid sequences from SRA and Next Generation Sequencing data. | ||||||||||
| Covid19_population_genomics | 5 | 4 years ago | Jupyter Notebook | |||||||
| Analysis of the population diversity of SARS-CoV-2 within and between individual patients | ||||||||||
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